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Cluster: HRGMv2_4189_CGC75

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4189_56 HRGMv2_4189_56_2 871 1188 - 4.A.3.2.8
pfam HRGMv2_4189_56 HRGMv2_4189_56_3 1193 1855 - Ribul_P_3_epim
TC HRGMv2_4189_56 HRGMv2_4189_56_4 1867 3159 - 4.A.3.2.2
pfam HRGMv2_4189_56 HRGMv2_4189_56_5 3229 4182 - PMI_typeI_cat
CAZyme HRGMv2_4189_56 HRGMv2_4189_56_6 4172 5581 - GH1
pfam HRGMv2_4189_56 HRGMv2_4189_56_7 6025 6273 + YjbT
pfam HRGMv2_4189_56 HRGMv2_4189_56_8 6401 6856 + Hexapep | Hexapep_2
TC HRGMv2_4189_56 HRGMv2_4189_56_9 6904 9000 - 1.B.14.16.4
Gene ID: HRGMv2_4189_56_2
Type: TC
Location: 871 - 1188 (-)
Gene ID: HRGMv2_4189_56_3
Type: pfam
Location: 1193 - 1855 (-)
Gene ID: HRGMv2_4189_56_4
Type: TC
Location: 1867 - 3159 (-)
Gene ID: HRGMv2_4189_56_5
Type: pfam
Location: 3229 - 4182 (-)
Gene ID: HRGMv2_4189_56_6
Type: CAZyme
Location: 4172 - 5581 (-)
Gene ID: HRGMv2_4189_56_7
Type: pfam
Location: 6025 - 6273 (+)
Gene ID: HRGMv2_4189_56_8
Type: pfam
Location: 6401 - 6856 (+)
Gene ID: HRGMv2_4189_56_9
Type: TC
Location: 6904 - 9000 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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