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Cluster: HRGMv2_4189_CGC73

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4189_49 HRGMv2_4189_49_4 3461 4120 - 9.B.27.2.1
pfam HRGMv2_4189_49 HRGMv2_4189_49_5 4366 5553 - Cys_Met_Meta_PP
TC HRGMv2_4189_49 HRGMv2_4189_49_6 5804 6535 + 1.A.30.2.1
TC HRGMv2_4189_49 HRGMv2_4189_49_7 6542 6967 + 1.A.30.2.1
TC HRGMv2_4189_49 HRGMv2_4189_49_8 7200 8651 + 1.B.52.2.1
TC HRGMv2_4189_49 HRGMv2_4189_49_9 8805 8954 + 2.A.2.3.2
TC HRGMv2_4189_49 HRGMv2_4189_49_10 8954 10222 + 2.A.2.3.4
CAZyme HRGMv2_4189_49 HRGMv2_4189_49_11 10233 11765 + CBM91 | GH43_10
Gene ID: HRGMv2_4189_49_4
Type: TC
Location: 3461 - 4120 (-)
Gene ID: HRGMv2_4189_49_5
Type: pfam
Location: 4366 - 5553 (-)
Gene ID: HRGMv2_4189_49_6
Type: TC
Location: 5804 - 6535 (+)
Gene ID: HRGMv2_4189_49_7
Type: TC
Location: 6542 - 6967 (+)
Gene ID: HRGMv2_4189_49_8
Type: TC
Location: 7200 - 8651 (+)
Gene ID: HRGMv2_4189_49_9
Type: TC
Location: 8805 - 8954 (+)
Gene ID: HRGMv2_4189_49_10
Type: TC
Location: 8954 - 10222 (+)
Gene ID: HRGMv2_4189_49_11
Type: CAZyme
Location: 10233 - 11765 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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