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Cluster: HRGMv2_4189_CGC67

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4189_43 HRGMv2_4189_43_29 38736 39026 + 3.A.4.1.1
TF HRGMv2_4189_43 HRGMv2_4189_43_30 39308 40096 + HTH_DeoR
TC HRGMv2_4189_43 HRGMv2_4189_43_31 40209 40682 + 4.A.6.1.4
TC HRGMv2_4189_43 HRGMv2_4189_43_32 40702 41472 + 4.A.6.1.4
TC HRGMv2_4189_43 HRGMv2_4189_43_33 41459 42328 + 4.A.6.1.4
TC HRGMv2_4189_43 HRGMv2_4189_43_34 42338 42775 + 4.A.6.2.2
CAZyme HRGMv2_4189_43 HRGMv2_4189_43_35 42882 43889 + GH105
CAZyme HRGMv2_4189_43 HRGMv2_4189_43_36 43923 45380 + GH154
Gene ID: HRGMv2_4189_43_29
Type: TC
Location: 38736 - 39026 (+)
Gene ID: HRGMv2_4189_43_30
Type: TF
Location: 39308 - 40096 (+)
Gene ID: HRGMv2_4189_43_31
Type: TC
Location: 40209 - 40682 (+)
Gene ID: HRGMv2_4189_43_32
Type: TC
Location: 40702 - 41472 (+)
Gene ID: HRGMv2_4189_43_33
Type: TC
Location: 41459 - 42328 (+)
Gene ID: HRGMv2_4189_43_34
Type: TC
Location: 42338 - 42775 (+)
Gene ID: HRGMv2_4189_43_35
Type: CAZyme
Location: 42882 - 43889 (+)
Gene ID: HRGMv2_4189_43_36
Type: CAZyme
Location: 43923 - 45380 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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