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Cluster: HRGMv2_4189_CGC56

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4189_28 HRGMv2_4189_28_21 22023 22784 + 2.A.109.2.3
CAZyme HRGMv2_4189_28 HRGMv2_4189_28_22 22812 23984 + GH33
pfam HRGMv2_4189_28 HRGMv2_4189_28_23 23981 24451 + DUF386
TC HRGMv2_4189_28 HRGMv2_4189_28_24 24464 25741 + 2.A.47.4.7
pfam HRGMv2_4189_28 HRGMv2_4189_28_25 25797 26585 - PhzC-PhzF
TC HRGMv2_4189_28 HRGMv2_4189_28_26 26788 27987 + 2.A.1.2.15
TC HRGMv2_4189_28 HRGMv2_4189_28_27 28030 28698 - 2.A.95.1.1
Gene ID: HRGMv2_4189_28_21
Type: TC
Location: 22023 - 22784 (+)
Gene ID: HRGMv2_4189_28_22
Type: CAZyme
Location: 22812 - 23984 (+)
Gene ID: HRGMv2_4189_28_23
Type: pfam
Location: 23981 - 24451 (+)
Gene ID: HRGMv2_4189_28_24
Type: TC
Location: 24464 - 25741 (+)
Gene ID: HRGMv2_4189_28_25
Type: pfam
Location: 25797 - 26585 (-)
Gene ID: HRGMv2_4189_28_26
Type: TC
Location: 26788 - 27987 (+)
Gene ID: HRGMv2_4189_28_27
Type: TC
Location: 28030 - 28698 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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