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Cluster: HRGMv2_4189_CGC55

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4189_27 HRGMv2_4189_27_35 32070 33575 - 2.A.17.1.2
NULL(UNKNOWN) HRGMv2_4189_27 HRGMv2_4189_27_36 33984 34166 - NULL(UNKNOWN)
[View Structural Homologs]
STP HRGMv2_4189_27 HRGMv2_4189_27_37 34170 34805 - HhH-GPD
TC HRGMv2_4189_27 HRGMv2_4189_27_38 34805 35500 - 3.D.6.1.4
TC HRGMv2_4189_27 HRGMv2_4189_27_39 35504 36124 - 3.D.6.1.4
TC HRGMv2_4189_27 HRGMv2_4189_27_40 36133 37185 - 3.D.6.1.4
TC HRGMv2_4189_27 HRGMv2_4189_27_41 37186 39315 - 3.D.6.1.4
TC HRGMv2_4189_27 HRGMv2_4189_27_42 39308 39883 - 3.D.6.1.4
TC HRGMv2_4189_27 HRGMv2_4189_27_43 39883 40464 - 3.D.6.1.4
pfam HRGMv2_4189_27 HRGMv2_4189_27_44 40542 40982 - DUF2569
TF HRGMv2_4189_27 HRGMv2_4189_27_45 41067 41282 - HHA
CAZyme HRGMv2_4189_27 HRGMv2_4189_27_46 41567 42937 - GH1
Gene ID: HRGMv2_4189_27_35
Type: TC
Location: 32070 - 33575 (-)
Gene ID: HRGMv2_4189_27_36
Type:
Location: 33984 - 34166 (-)
Gene ID: HRGMv2_4189_27_37
Type: STP
Location: 34170 - 34805 (-)
Gene ID: HRGMv2_4189_27_38
Type: TC
Location: 34805 - 35500 (-)
Gene ID: HRGMv2_4189_27_39
Type: TC
Location: 35504 - 36124 (-)
Gene ID: HRGMv2_4189_27_40
Type: TC
Location: 36133 - 37185 (-)
Gene ID: HRGMv2_4189_27_41
Type: TC
Location: 37186 - 39315 (-)
Gene ID: HRGMv2_4189_27_42
Type: TC
Location: 39308 - 39883 (-)
Gene ID: HRGMv2_4189_27_43
Type: TC
Location: 39883 - 40464 (-)
Gene ID: HRGMv2_4189_27_44
Type: pfam
Location: 40542 - 40982 (-)
Gene ID: HRGMv2_4189_27_45
Type: TF
Location: 41067 - 41282 (-)
Gene ID: HRGMv2_4189_27_46
Type: CAZyme
Location: 41567 - 42937 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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