Cluster: HRGMv2_4189_CGC43
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4189
- CGC Family ID: CGCFAM_00041
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4189_17 | HRGMv2_4189_17_55 | 52602 | 54764 | - | GH28 |
| CAZyme | HRGMv2_4189_17 | HRGMv2_4189_17_56 | 54780 | 55862 | - | GH105 |
| TC | HRGMv2_4189_17 | HRGMv2_4189_17_57 | 55874 | 57163 | - | 3.A.1.1.11 |
| TC | HRGMv2_4189_17 | HRGMv2_4189_17_58 | 57585 | 59735 | + | 2.A.114.1.10 |
| pfam | HRGMv2_4189_17 | HRGMv2_4189_17_59 | 59843 | 60046 | + | Sel_put |
| TC | HRGMv2_4189_17 | HRGMv2_4189_17_60 | 60058 | 61011 | + | 9.B.10.1.1 |
Gene ID: HRGMv2_4189_17_55
Type: CAZyme
Location: 52602 - 54764 (-)
Type: CAZyme
Location: 52602 - 54764 (-)
Gene ID: HRGMv2_4189_17_56
Type: CAZyme
Location: 54780 - 55862 (-)
Type: CAZyme
Location: 54780 - 55862 (-)
Gene ID: HRGMv2_4189_17_57
Type: TC
Location: 55874 - 57163 (-)
Type: TC
Location: 55874 - 57163 (-)
Gene ID: HRGMv2_4189_17_58
Type: TC
Location: 57585 - 59735 (+)
Type: TC
Location: 57585 - 59735 (+)
Gene ID: HRGMv2_4189_17_59
Type: pfam
Location: 59843 - 60046 (+)
Type: pfam
Location: 59843 - 60046 (+)
Gene ID: HRGMv2_4189_17_60
Type: TC
Location: 60058 - 61011 (+)
Type: TC
Location: 60058 - 61011 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Kluyvera
Species
Kluyvera georgiana
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.