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Cluster: HRGMv2_4189_CGC40

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4189_15 HRGMv2_4189_15_2 795 1601 - 3.A.1.5.42
TC HRGMv2_4189_15 HRGMv2_4189_15_3 1603 2595 - 3.A.1.5.42
TC HRGMv2_4189_15 HRGMv2_4189_15_4 2595 3485 - 3.A.1.5.42
TC HRGMv2_4189_15 HRGMv2_4189_15_5 3472 4437 - 3.A.1.5.5
TC HRGMv2_4189_15 HRGMv2_4189_15_6 4434 6083 - 3.A.1.5.5
CAZyme HRGMv2_4189_15 HRGMv2_4189_15_7 6174 8471 - GH39
peptidase HRGMv2_4189_15 HRGMv2_4189_15_8 8644 9816 + M20.UPD
TC HRGMv2_4189_15 HRGMv2_4189_15_9 9844 11235 + 2.A.1.3.59
Gene ID: HRGMv2_4189_15_2
Type: TC
Location: 795 - 1601 (-)
Gene ID: HRGMv2_4189_15_3
Type: TC
Location: 1603 - 2595 (-)
Gene ID: HRGMv2_4189_15_4
Type: TC
Location: 2595 - 3485 (-)
Gene ID: HRGMv2_4189_15_5
Type: TC
Location: 3472 - 4437 (-)
Gene ID: HRGMv2_4189_15_6
Type: TC
Location: 4434 - 6083 (-)
Gene ID: HRGMv2_4189_15_7
Type: CAZyme
Location: 6174 - 8471 (-)
Gene ID: HRGMv2_4189_15_8
Type: peptidase
Location: 8644 - 9816 (+)
Gene ID: HRGMv2_4189_15_9
Type: TC
Location: 9844 - 11235 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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