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Cluster: HRGMv2_4189_CGC38

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4189_13 HRGMv2_4189_13_60 60438 61397 + 3.A.1.14.2
TC HRGMv2_4189_13 HRGMv2_4189_13_61 61498 62736 - 2.A.1.38.1
TC HRGMv2_4189_13 HRGMv2_4189_13_62 62848 63855 + 3.A.1.14.2
TC HRGMv2_4189_13 HRGMv2_4189_13_63 63852 64844 + 3.A.1.14.2
TC HRGMv2_4189_13 HRGMv2_4189_13_64 64841 65635 + 3.A.1.14.2
TC HRGMv2_4189_13 HRGMv2_4189_13_65 65767 69630 - 4.C.1.1.6
pfam HRGMv2_4189_13 HRGMv2_4189_13_66 69627 69845 - MbtH
peptidase HRGMv2_4189_13 HRGMv2_4189_13_67 69861 71069 - S09.UNW
TC HRGMv2_4189_13 HRGMv2_4189_13_68 71262 73520 + 1.B.14.1.22
pfam HRGMv2_4189_13 HRGMv2_4189_13_69 73569 74216 + ACPS | 4PPT_N
TC HRGMv2_4189_13 HRGMv2_4189_13_70 74334 75275 + 3.A.1.2.11
pfam HRGMv2_4189_13 HRGMv2_4189_13_71 75287 75895 + DUF2291
TC HRGMv2_4189_13 HRGMv2_4189_13_72 75895 77421 + 3.A.1.2.11
TC HRGMv2_4189_13 HRGMv2_4189_13_73 77423 78511 + 3.A.1.2.11
sulfatase HRGMv2_4189_13 HRGMv2_4189_13_74 78621 80177 + S1_8
NULL(UNKNOWN) HRGMv2_4189_13 HRGMv2_4189_13_75 80473 80607 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4189_13 HRGMv2_4189_13_76 80706 82103 + 4.A.1.2.2
CAZyme HRGMv2_4189_13 HRGMv2_4189_13_77 82125 83408 + GH140
Gene ID: HRGMv2_4189_13_60
Type: TC
Location: 60438 - 61397 (+)
Gene ID: HRGMv2_4189_13_61
Type: TC
Location: 61498 - 62736 (-)
Gene ID: HRGMv2_4189_13_62
Type: TC
Location: 62848 - 63855 (+)
Gene ID: HRGMv2_4189_13_63
Type: TC
Location: 63852 - 64844 (+)
Gene ID: HRGMv2_4189_13_64
Type: TC
Location: 64841 - 65635 (+)
Gene ID: HRGMv2_4189_13_65
Type: TC
Location: 65767 - 69630 (-)
Gene ID: HRGMv2_4189_13_66
Type: pfam
Location: 69627 - 69845 (-)
Gene ID: HRGMv2_4189_13_67
Type: peptidase
Location: 69861 - 71069 (-)
Gene ID: HRGMv2_4189_13_68
Type: TC
Location: 71262 - 73520 (+)
Gene ID: HRGMv2_4189_13_69
Type: pfam
Location: 73569 - 74216 (+)
Gene ID: HRGMv2_4189_13_70
Type: TC
Location: 74334 - 75275 (+)
Gene ID: HRGMv2_4189_13_71
Type: pfam
Location: 75287 - 75895 (+)
Gene ID: HRGMv2_4189_13_72
Type: TC
Location: 75895 - 77421 (+)
Gene ID: HRGMv2_4189_13_73
Type: TC
Location: 77423 - 78511 (+)
Gene ID: HRGMv2_4189_13_74
Type: sulfatase
Location: 78621 - 80177 (+)
Gene ID: HRGMv2_4189_13_75
Type:
Location: 80473 - 80607 (-)
Gene ID: HRGMv2_4189_13_76
Type: TC
Location: 80706 - 82103 (+)
Gene ID: HRGMv2_4189_13_77
Type: CAZyme
Location: 82125 - 83408 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_4189_13_62 vegetarian > omnivore 1.09030 0.04484
HRGMv2_4189_13_64 vegetarian > omnivore 1.20964 0.04484

🧭 Explore Read Mapping of CGC

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