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Cluster: HRGMv2_4189_CGC34

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4189_10 HRGMv2_4189_10_61 68744 69694 + 1.A.35.1.2
TC HRGMv2_4189_10 HRGMv2_4189_10_62 69773 70666 - 2.A.7.7.2
pfam HRGMv2_4189_10 HRGMv2_4189_10_63 70717 71184 - 4HBT | 4HBT_3
pfam HRGMv2_4189_10 HRGMv2_4189_10_64 71346 72212 + PLA1
TC HRGMv2_4189_10 HRGMv2_4189_10_65 72331 74160 + 2.A.16.2.2
TC HRGMv2_4189_10 HRGMv2_4189_10_66 74242 74865 + 2.A.76.1.2
TC HRGMv2_4189_10 HRGMv2_4189_10_67 74917 75537 - 2.A.76.1.1
peptidase HRGMv2_4189_10 HRGMv2_4189_10_68 75647 76639 + S33.UNW
pfam HRGMv2_4189_10 HRGMv2_4189_10_69 76681 77481 + Hydrolase | S6PP | S6PP | Hydrolase_3
TC HRGMv2_4189_10 HRGMv2_4189_10_70 77568 78467 + 2.A.7.3.61
TF HRGMv2_4189_10 HRGMv2_4189_10_71 78355 79308 - HTH_1
pfam HRGMv2_4189_10 HRGMv2_4189_10_72 79426 81687 + Meth_synt_2 | Meth_synt_2 | Meth_synt_1
CAZyme HRGMv2_4189_10 HRGMv2_4189_10_73 81805 83268 - GH1
Gene ID: HRGMv2_4189_10_61
Type: TC
Location: 68744 - 69694 (+)
Gene ID: HRGMv2_4189_10_62
Type: TC
Location: 69773 - 70666 (-)
Gene ID: HRGMv2_4189_10_63
Type: pfam
Location: 70717 - 71184 (-)
Gene ID: HRGMv2_4189_10_64
Type: pfam
Location: 71346 - 72212 (+)
Gene ID: HRGMv2_4189_10_65
Type: TC
Location: 72331 - 74160 (+)
Gene ID: HRGMv2_4189_10_66
Type: TC
Location: 74242 - 74865 (+)
Gene ID: HRGMv2_4189_10_67
Type: TC
Location: 74917 - 75537 (-)
Gene ID: HRGMv2_4189_10_68
Type: peptidase
Location: 75647 - 76639 (+)
Gene ID: HRGMv2_4189_10_69
Type: pfam
Location: 76681 - 77481 (+)
Gene ID: HRGMv2_4189_10_70
Type: TC
Location: 77568 - 78467 (+)
Gene ID: HRGMv2_4189_10_71
Type: TF
Location: 78355 - 79308 (-)
Gene ID: HRGMv2_4189_10_72
Type: pfam
Location: 79426 - 81687 (+)
Gene ID: HRGMv2_4189_10_73
Type: CAZyme
Location: 81805 - 83268 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_4189_10_67 vegetarian > omnivore 1.01851 0.04484

🧭 Explore Read Mapping of CGC

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