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Cluster: HRGMv2_4189_CGC29

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4189_7 HRGMv2_4189_7_77 81008 82345 - 2.A.40.7.6
pfam HRGMv2_4189_7 HRGMv2_4189_7_78 82515 83180 + Hydrolase | HAD_2
CAZyme HRGMv2_4189_7 HRGMv2_4189_7_79 83314 84492 - CE1
pfam HRGMv2_4189_7 HRGMv2_4189_7_80 84665 85390 - PhoU | PhoU
TC HRGMv2_4189_7 HRGMv2_4189_7_81 85405 86178 - 3.A.1.7.1
TC HRGMv2_4189_7 HRGMv2_4189_7_82 86288 87178 - 3.A.1.7.1
TC HRGMv2_4189_7 HRGMv2_4189_7_83 87178 88137 - 3.A.1.7.1
TC HRGMv2_4189_7 HRGMv2_4189_7_84 88210 89250 - 3.A.1.7.1
STP HRGMv2_4189_7 HRGMv2_4189_7_85 89549 91378 - SIS | SIS
pfam HRGMv2_4189_7 HRGMv2_4189_7_86 91547 92920 - Hexapep | Hexapep | NTP_transferase | IspD | NTP_transf_3 | Hexapep_2
CAZyme HRGMv2_4189_7 HRGMv2_4189_7_87 93265 95442 + PL9_1
TC HRGMv2_4189_7 HRGMv2_4189_7_88 95958 96377 - 3.A.2.1.1
TC HRGMv2_4189_7 HRGMv2_4189_7_89 96398 97780 - 3.A.2.1.1
TC HRGMv2_4189_7 HRGMv2_4189_7_90 97807 98670 - 3.A.2.1.1
TC HRGMv2_4189_7 HRGMv2_4189_7_91 98720 100261 - 3.A.2.1.1
TC HRGMv2_4189_7 HRGMv2_4189_7_92 100274 100807 - 3.A.2.1.1
TC HRGMv2_4189_7 HRGMv2_4189_7_93 100822 101292 - 3.A.2.1.1
TC HRGMv2_4189_7 HRGMv2_4189_7_94 101358 101597 - 3.A.2.1.1
TC HRGMv2_4189_7 HRGMv2_4189_7_95 101644 102459 - 3.A.2.1.1
TC HRGMv2_4189_7 HRGMv2_4189_7_96 102468 102848 - 1.A.77.3.11
Gene ID: HRGMv2_4189_7_77
Type: TC
Location: 81008 - 82345 (-)
Gene ID: HRGMv2_4189_7_78
Type: pfam
Location: 82515 - 83180 (+)
Gene ID: HRGMv2_4189_7_79
Type: CAZyme
Location: 83314 - 84492 (-)
Gene ID: HRGMv2_4189_7_80
Type: pfam
Location: 84665 - 85390 (-)
Gene ID: HRGMv2_4189_7_81
Type: TC
Location: 85405 - 86178 (-)
Gene ID: HRGMv2_4189_7_82
Type: TC
Location: 86288 - 87178 (-)
Gene ID: HRGMv2_4189_7_83
Type: TC
Location: 87178 - 88137 (-)
Gene ID: HRGMv2_4189_7_84
Type: TC
Location: 88210 - 89250 (-)
Gene ID: HRGMv2_4189_7_85
Type: STP
Location: 89549 - 91378 (-)
Gene ID: HRGMv2_4189_7_86
Type: pfam
Location: 91547 - 92920 (-)
Gene ID: HRGMv2_4189_7_87
Type: CAZyme
Location: 93265 - 95442 (+)
Gene ID: HRGMv2_4189_7_88
Type: TC
Location: 95958 - 96377 (-)
Gene ID: HRGMv2_4189_7_89
Type: TC
Location: 96398 - 97780 (-)
Gene ID: HRGMv2_4189_7_90
Type: TC
Location: 97807 - 98670 (-)
Gene ID: HRGMv2_4189_7_91
Type: TC
Location: 98720 - 100261 (-)
Gene ID: HRGMv2_4189_7_92
Type: TC
Location: 100274 - 100807 (-)
Gene ID: HRGMv2_4189_7_93
Type: TC
Location: 100822 - 101292 (-)
Gene ID: HRGMv2_4189_7_94
Type: TC
Location: 101358 - 101597 (-)
Gene ID: HRGMv2_4189_7_95
Type: TC
Location: 101644 - 102459 (-)
Gene ID: HRGMv2_4189_7_96
Type: TC
Location: 102468 - 102848 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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