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Cluster: HRGMv2_4189_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4189_7 HRGMv2_4189_7_4 2660 2965 - 4.A.3.2.7
TC HRGMv2_4189_7 HRGMv2_4189_7_5 2988 4313 - 4.A.3.2.6
TC HRGMv2_4189_7 HRGMv2_4189_7_6 4324 4638 - 4.A.3.2.9
TC HRGMv2_4189_7 HRGMv2_4189_7_7 4815 6104 + 4.A.3.2.6
pfam HRGMv2_4189_7 HRGMv2_4189_7_8 6241 7047 + Lipase_GDSL | Lipase_GDSL_2
CAZyme HRGMv2_4189_7 HRGMv2_4189_7_9 7044 8441 + GH1
STP HRGMv2_4189_7 HRGMv2_4189_7_10 8538 9188 - TetR_N
TC HRGMv2_4189_7 HRGMv2_4189_7_11 9280 10779 + 2.A.1.3.32
pfam HRGMv2_4189_7 HRGMv2_4189_7_12 10894 11310 - Acetyltransf_1 | Acetyltransf_7 | Acetyltransf_10
STP HRGMv2_4189_7 HRGMv2_4189_7_13 11501 12067 + TetR_N
TC HRGMv2_4189_7 HRGMv2_4189_7_14 12210 13373 + 2.A.1.2.7
STP HRGMv2_4189_7 HRGMv2_4189_7_15 13535 14434 + SIS
TC HRGMv2_4189_7 HRGMv2_4189_7_16 14460 15914 + 4.A.1.2.7
TC HRGMv2_4189_7 HRGMv2_4189_7_17 16005 16907 + 2.A.7.3.12
NULL(UNKNOWN) HRGMv2_4189_7 HRGMv2_4189_7_18 16958 17242 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4189_7 HRGMv2_4189_7_19 17872 18174 + 4.A.3.2.6
pfam HRGMv2_4189_7 HRGMv2_4189_7_20 18338 19726 + LamB
TC HRGMv2_4189_7 HRGMv2_4189_7_21 19781 20578 - 3.A.1.11.5
TC HRGMv2_4189_7 HRGMv2_4189_7_22 20581 21441 - 3.A.1.11.5
TC HRGMv2_4189_7 HRGMv2_4189_7_23 21444 22553 - 3.A.1.11.5
TC HRGMv2_4189_7 HRGMv2_4189_7_24 22559 23572 - 3.A.1.11.5
Gene ID: HRGMv2_4189_7_4
Type: TC
Location: 2660 - 2965 (-)
Gene ID: HRGMv2_4189_7_5
Type: TC
Location: 2988 - 4313 (-)
Gene ID: HRGMv2_4189_7_6
Type: TC
Location: 4324 - 4638 (-)
Gene ID: HRGMv2_4189_7_7
Type: TC
Location: 4815 - 6104 (+)
Gene ID: HRGMv2_4189_7_8
Type: pfam
Location: 6241 - 7047 (+)
Gene ID: HRGMv2_4189_7_9
Type: CAZyme
Location: 7044 - 8441 (+)
Gene ID: HRGMv2_4189_7_10
Type: STP
Location: 8538 - 9188 (-)
Gene ID: HRGMv2_4189_7_11
Type: TC
Location: 9280 - 10779 (+)
Gene ID: HRGMv2_4189_7_12
Type: pfam
Location: 10894 - 11310 (-)
Gene ID: HRGMv2_4189_7_13
Type: STP
Location: 11501 - 12067 (+)
Gene ID: HRGMv2_4189_7_14
Type: TC
Location: 12210 - 13373 (+)
Gene ID: HRGMv2_4189_7_15
Type: STP
Location: 13535 - 14434 (+)
Gene ID: HRGMv2_4189_7_16
Type: TC
Location: 14460 - 15914 (+)
Gene ID: HRGMv2_4189_7_17
Type: TC
Location: 16005 - 16907 (+)
Gene ID: HRGMv2_4189_7_18
Type:
Location: 16958 - 17242 (+)
Gene ID: HRGMv2_4189_7_19
Type: TC
Location: 17872 - 18174 (+)
Gene ID: HRGMv2_4189_7_20
Type: pfam
Location: 18338 - 19726 (+)
Gene ID: HRGMv2_4189_7_21
Type: TC
Location: 19781 - 20578 (-)
Gene ID: HRGMv2_4189_7_22
Type: TC
Location: 20581 - 21441 (-)
Gene ID: HRGMv2_4189_7_23
Type: TC
Location: 21444 - 22553 (-)
Gene ID: HRGMv2_4189_7_24
Type: TC
Location: 22559 - 23572 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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