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Cluster: HRGMv2_4189_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4189_6 HRGMv2_4189_6_71 81829 83223 - 1.B.15.1.1
NULL(UNKNOWN) HRGMv2_4189_6 HRGMv2_4189_6_72 83582 83752 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_4189_6 HRGMv2_4189_6_73 83908 84120 - YdgH_BhsA-like
TC HRGMv2_4189_6 HRGMv2_4189_6_74 84447 87047 + 3.A.23.1.1
pfam HRGMv2_4189_6 HRGMv2_4189_6_75 87220 87702 + EIIA-man
CAZyme HRGMv2_4189_6 HRGMv2_4189_6_76 87699 88877 + GH88
TC HRGMv2_4189_6 HRGMv2_4189_6_77 88890 89387 + 4.A.6.1.3
TC HRGMv2_4189_6 HRGMv2_4189_6_78 89399 90199 + 4.A.6.1.19
TC HRGMv2_4189_6 HRGMv2_4189_6_79 90192 91034 + 4.A.6.1.19
Gene ID: HRGMv2_4189_6_71
Type: TC
Location: 81829 - 83223 (-)
Gene ID: HRGMv2_4189_6_72
Type:
Location: 83582 - 83752 (-)
Gene ID: HRGMv2_4189_6_73
Type: pfam
Location: 83908 - 84120 (-)
Gene ID: HRGMv2_4189_6_74
Type: TC
Location: 84447 - 87047 (+)
Gene ID: HRGMv2_4189_6_75
Type: pfam
Location: 87220 - 87702 (+)
Gene ID: HRGMv2_4189_6_76
Type: CAZyme
Location: 87699 - 88877 (+)
Gene ID: HRGMv2_4189_6_77
Type: TC
Location: 88890 - 89387 (+)
Gene ID: HRGMv2_4189_6_78
Type: TC
Location: 89399 - 90199 (+)
Gene ID: HRGMv2_4189_6_79
Type: TC
Location: 90192 - 91034 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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