Cluster: HRGMv2_4189_CGC23
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate: alpha-glucan
- Genome ID: HRGMv2_4189
- CGC Family ID: CGCFAM_00214
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4189_6 | HRGMv2_4189_6_39 | 44499 | 45935 | - | GH32 |
| TC | HRGMv2_4189_6 | HRGMv2_4189_6_40 | 45951 | 47192 | - | 2.A.1.5.3 |
| TF | HRGMv2_4189_6 | HRGMv2_4189_6_41 | 47425 | 48420 | + | LacI |
| pfam | HRGMv2_4189_6 | HRGMv2_4189_6_42 | 48712 | 48924 | - | Ribosomal_L31 |
| TC | HRGMv2_4189_6 | HRGMv2_4189_6_43 | 49245 | 51440 | + | 3.A.11.3.1 |
Gene ID: HRGMv2_4189_6_39
Type: CAZyme
Location: 44499 - 45935 (-)
Type: CAZyme
Location: 44499 - 45935 (-)
Gene ID: HRGMv2_4189_6_40
Type: TC
Location: 45951 - 47192 (-)
Type: TC
Location: 45951 - 47192 (-)
Gene ID: HRGMv2_4189_6_41
Type: TF
Location: 47425 - 48420 (+)
Type: TF
Location: 47425 - 48420 (+)
Gene ID: HRGMv2_4189_6_42
Type: pfam
Location: 48712 - 48924 (-)
Type: pfam
Location: 48712 - 48924 (-)
Gene ID: HRGMv2_4189_6_43
Type: TC
Location: 49245 - 51440 (+)
Type: TC
Location: 49245 - 51440 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Kluyvera
Species
Kluyvera georgiana
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.