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Cluster: HRGMv2_4189_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4189_6 HRGMv2_4189_6_22 23967 24323 - 4.A.2.1.10
TC HRGMv2_4189_6 HRGMv2_4189_6_23 24415 24735 - 4.A.2.1.10
TC HRGMv2_4189_6 HRGMv2_4189_6_24 24753 25832 - 4.A.2.1.10
TC HRGMv2_4189_6 HRGMv2_4189_6_25 26145 28646 + 4.A.2.1.10
pfam HRGMv2_4189_6 HRGMv2_4189_6_26 28658 29320 + TAL_FSA
pfam HRGMv2_4189_6 HRGMv2_4189_6_27 29332 30435 + Fe-ADH | Fe-ADH_2
CAZyme HRGMv2_4189_6 HRGMv2_4189_6_28 30501 32675 - AA2
TC HRGMv2_4189_6 HRGMv2_4189_6_29 32902 33807 - 2.A.7.3.26
pfam HRGMv2_4189_6 HRGMv2_4189_6_30 33920 34807 - MTHFR
TC HRGMv2_4189_6 HRGMv2_4189_6_31 35275 36774 + 4.A.1.1.13
Gene ID: HRGMv2_4189_6_22
Type: TC
Location: 23967 - 24323 (-)
Gene ID: HRGMv2_4189_6_23
Type: TC
Location: 24415 - 24735 (-)
Gene ID: HRGMv2_4189_6_24
Type: TC
Location: 24753 - 25832 (-)
Gene ID: HRGMv2_4189_6_25
Type: TC
Location: 26145 - 28646 (+)
Gene ID: HRGMv2_4189_6_26
Type: pfam
Location: 28658 - 29320 (+)
Gene ID: HRGMv2_4189_6_27
Type: pfam
Location: 29332 - 30435 (+)
Gene ID: HRGMv2_4189_6_28
Type: CAZyme
Location: 30501 - 32675 (-)
Gene ID: HRGMv2_4189_6_29
Type: TC
Location: 32902 - 33807 (-)
Gene ID: HRGMv2_4189_6_30
Type: pfam
Location: 33920 - 34807 (-)
Gene ID: HRGMv2_4189_6_31
Type: TC
Location: 35275 - 36774 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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