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Cluster: HRGMv2_4189_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4189_5 HRGMv2_4189_5_81 79167 80549 + 2.A.40.4.2
pfam HRGMv2_4189_5 HRGMv2_4189_5_82 80527 81027 + OHCU_decarbox
TC HRGMv2_4189_5 HRGMv2_4189_5_83 81024 81350 + 9.B.35.1.3
peptidase HRGMv2_4189_5 HRGMv2_4189_5_84 81396 82820 - M38.UNW
TC HRGMv2_4189_5 HRGMv2_4189_5_85 82820 84307 - 2.A.39.3.4
TF HRGMv2_4189_5 HRGMv2_4189_5_86 84452 85168 + GntR
pfam HRGMv2_4189_5 HRGMv2_4189_5_87 85168 85911 + Asp_Glu_race
CAZyme HRGMv2_4189_5 HRGMv2_4189_5_88 85925 86857 + CE4
Gene ID: HRGMv2_4189_5_81
Type: TC
Location: 79167 - 80549 (+)
Gene ID: HRGMv2_4189_5_82
Type: pfam
Location: 80527 - 81027 (+)
Gene ID: HRGMv2_4189_5_83
Type: TC
Location: 81024 - 81350 (+)
Gene ID: HRGMv2_4189_5_84
Type: peptidase
Location: 81396 - 82820 (-)
Gene ID: HRGMv2_4189_5_85
Type: TC
Location: 82820 - 84307 (-)
Gene ID: HRGMv2_4189_5_86
Type: TF
Location: 84452 - 85168 (+)
Gene ID: HRGMv2_4189_5_87
Type: pfam
Location: 85168 - 85911 (+)
Gene ID: HRGMv2_4189_5_88
Type: CAZyme
Location: 85925 - 86857 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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