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Cluster: HRGMv2_4188_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4188_107 HRGMv2_4188_107_6 4652 5857 + 1.B.52.2.1
pfam HRGMv2_4188_107 HRGMv2_4188_107_7 6012 6959 + Flagellin_N | Flagellin_C
TC HRGMv2_4188_107 HRGMv2_4188_107_8 7058 7462 + 3.A.1.120.2
TC HRGMv2_4188_107 HRGMv2_4188_107_9 7480 8694 + 3.A.1.120.6
pfam HRGMv2_4188_107 HRGMv2_4188_107_10 8731 9282 - Acetyltransf_1
TC HRGMv2_4188_107 HRGMv2_4188_107_11 9385 10146 + 3.A.1.3.17
CAZyme HRGMv2_4188_107 HRGMv2_4188_107_12 10218 11309 + GH177
Gene ID: HRGMv2_4188_107_6
Type: TC
Location: 4652 - 5857 (+)
Gene ID: HRGMv2_4188_107_7
Type: pfam
Location: 6012 - 6959 (+)
Gene ID: HRGMv2_4188_107_8
Type: TC
Location: 7058 - 7462 (+)
Gene ID: HRGMv2_4188_107_9
Type: TC
Location: 7480 - 8694 (+)
Gene ID: HRGMv2_4188_107_10
Type: pfam
Location: 8731 - 9282 (-)
Gene ID: HRGMv2_4188_107_11
Type: TC
Location: 9385 - 10146 (+)
Gene ID: HRGMv2_4188_107_12
Type: CAZyme
Location: 10218 - 11309 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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