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Cluster: HRGMv2_4187_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4187_21 HRGMv2_4187_21_7 8489 9502 + GH33
pfam HRGMv2_4187_21 HRGMv2_4187_21_8 9531 10493 + TctC
pfam HRGMv2_4187_21 HRGMv2_4187_21_9 10519 10992 + TctB
TC HRGMv2_4187_21 HRGMv2_4187_21_10 10994 12487 + 2.A.80.1.1
pfam HRGMv2_4187_21 HRGMv2_4187_21_11 12607 13539 + DHDPS
TC HRGMv2_4187_21 HRGMv2_4187_21_12 13608 14600 + 2.A.56.1.3
TC HRGMv2_4187_21 HRGMv2_4187_21_13 14687 15985 + 2.A.56.1.6
pfam HRGMv2_4187_21 HRGMv2_4187_21_14 15994 16605 + DctQ
TC HRGMv2_4187_21 HRGMv2_4187_21_15 16765 17832 + 1.B.42.1.2
Gene ID: HRGMv2_4187_21_7
Type: CAZyme
Location: 8489 - 9502 (+)
Gene ID: HRGMv2_4187_21_8
Type: pfam
Location: 9531 - 10493 (+)
Gene ID: HRGMv2_4187_21_9
Type: pfam
Location: 10519 - 10992 (+)
Gene ID: HRGMv2_4187_21_10
Type: TC
Location: 10994 - 12487 (+)
Gene ID: HRGMv2_4187_21_11
Type: pfam
Location: 12607 - 13539 (+)
Gene ID: HRGMv2_4187_21_12
Type: TC
Location: 13608 - 14600 (+)
Gene ID: HRGMv2_4187_21_13
Type: TC
Location: 14687 - 15985 (+)
Gene ID: HRGMv2_4187_21_14
Type: pfam
Location: 15994 - 16605 (+)
Gene ID: HRGMv2_4187_21_15
Type: TC
Location: 16765 - 17832 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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