Cluster: HRGMv2_4187_CGC5
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4187
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4187_15 | HRGMv2_4187_15_116 | 132322 | 133308 | - | 2.A.7.3.47 |
| pfam | HRGMv2_4187_15 | HRGMv2_4187_15_117 | 133327 | 133797 | - | FxsA |
| pfam | HRGMv2_4187_15 | HRGMv2_4187_15_118 | 133921 | 135666 | + | DsbD_TM | DsbD_N | Thioredoxin_2 | DsbD_2 | Thioredoxin_7 |
| CAZyme | HRGMv2_4187_15 | HRGMv2_4187_15_119 | 135772 | 136827 | - | GT4 |
Gene ID: HRGMv2_4187_15_116
Type: TC
Location: 132322 - 133308 (-)
Type: TC
Location: 132322 - 133308 (-)
Gene ID: HRGMv2_4187_15_117
Type: pfam
Location: 133327 - 133797 (-)
Type: pfam
Location: 133327 - 133797 (-)
Gene ID: HRGMv2_4187_15_118
Type: pfam
Location: 133921 - 135666 (+)
Type: pfam
Location: 133921 - 135666 (+)
Gene ID: HRGMv2_4187_15_119
Type: CAZyme
Location: 135772 - 136827 (-)
Type: CAZyme
Location: 135772 - 136827 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Succinivibrionaceae
Genus
Succinivibrio
Species
Succinivibrio hippei_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.