Cluster: HRGMv2_4187_CGC21
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4187
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4187_60 | HRGMv2_4187_60_48 | 49264 | 50640 | + | 2.A.22.5.3 |
| TC | HRGMv2_4187_60 | HRGMv2_4187_60_49 | 50642 | 52012 | + | 2.A.22.5.3 |
| TC | HRGMv2_4187_60 | HRGMv2_4187_60_50 | 52074 | 53447 | + | 2.A.22.5.3 |
| CAZyme | HRGMv2_4187_60 | HRGMv2_4187_60_51 | 53550 | 55550 | + | GH23 |
Gene ID: HRGMv2_4187_60_48
Type: TC
Location: 49264 - 50640 (+)
Type: TC
Location: 49264 - 50640 (+)
Gene ID: HRGMv2_4187_60_49
Type: TC
Location: 50642 - 52012 (+)
Type: TC
Location: 50642 - 52012 (+)
Gene ID: HRGMv2_4187_60_50
Type: TC
Location: 52074 - 53447 (+)
Type: TC
Location: 52074 - 53447 (+)
Gene ID: HRGMv2_4187_60_51
Type: CAZyme
Location: 53550 - 55550 (+)
Type: CAZyme
Location: 53550 - 55550 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Succinivibrionaceae
Genus
Succinivibrio
Species
Succinivibrio hippei_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.