Cluster: HRGMv2_4187_CGC2
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4187
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4187_10 | HRGMv2_4187_10_3 | 1367 | 2530 | - | CE9 |
| TC | HRGMv2_4187_10 | HRGMv2_4187_10_4 | 2564 | 3937 | - | 3.A.18.1.1 |
| pfam | HRGMv2_4187_10 | HRGMv2_4187_10_5 | 3934 | 4194 | - | Sdh5 |
| sulfatase | HRGMv2_4187_10 | HRGMv2_4187_10_6 | 4207 | 5001 | - | S1_63 |
| TC | HRGMv2_4187_10 | HRGMv2_4187_10_7 | 5081 | 7369 | - | 8.A.7.1.5 |
Gene ID: HRGMv2_4187_10_3
Type: CAZyme
Location: 1367 - 2530 (-)
Type: CAZyme
Location: 1367 - 2530 (-)
Gene ID: HRGMv2_4187_10_4
Type: TC
Location: 2564 - 3937 (-)
Type: TC
Location: 2564 - 3937 (-)
Gene ID: HRGMv2_4187_10_5
Type: pfam
Location: 3934 - 4194 (-)
Type: pfam
Location: 3934 - 4194 (-)
Gene ID: HRGMv2_4187_10_6
Type: sulfatase
Location: 4207 - 5001 (-)
Type: sulfatase
Location: 4207 - 5001 (-)
Gene ID: HRGMv2_4187_10_7
Type: TC
Location: 5081 - 7369 (-)
Type: TC
Location: 5081 - 7369 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Succinivibrionaceae
Genus
Succinivibrio
Species
Succinivibrio hippei_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.