Cluster: HRGMv2_4187_CGC19
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4187
- CGC Family ID: CGCFAM_09885
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4187_52 | HRGMv2_4187_52_36 | 43827 | 45161 | - | 2.A.40.7.6 |
| NULL(UNKNOWN) | HRGMv2_4187_52 | HRGMv2_4187_52_37 | 45590 | 45907 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4187_52 | HRGMv2_4187_52_38 | 46296 | 47483 | - | 2.A.1.60.1 |
| CAZyme | HRGMv2_4187_52 | HRGMv2_4187_52_39 | 48056 | 49891 | + | GH13_19 |
Gene ID: HRGMv2_4187_52_36
Type: TC
Location: 43827 - 45161 (-)
Type: TC
Location: 43827 - 45161 (-)
Gene ID: HRGMv2_4187_52_37
Type:
Location: 45590 - 45907 (+)
Type:
Location: 45590 - 45907 (+)
Gene ID: HRGMv2_4187_52_38
Type: TC
Location: 46296 - 47483 (-)
Type: TC
Location: 46296 - 47483 (-)
Gene ID: HRGMv2_4187_52_39
Type: CAZyme
Location: 48056 - 49891 (+)
Type: CAZyme
Location: 48056 - 49891 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Succinivibrionaceae
Genus
Succinivibrio
Species
Succinivibrio hippei_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.