Cluster: HRGMv2_4187_CGC18
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4187
- CGC Family ID: CGCFAM_04027
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4187_52 | HRGMv2_4187_52_18 | 20013 | 22061 | - | GT51 |
| TC | HRGMv2_4187_52 | HRGMv2_4187_52_19 | 22090 | 23160 | + | 9.A.23.1.1 |
| peptidase | HRGMv2_4187_52 | HRGMv2_4187_52_20 | 23664 | 28262 | - | I39.UPW |
| TC | HRGMv2_4187_52 | HRGMv2_4187_52_21 | 28373 | 29116 | - | 2.A.64.1.1 |
Gene ID: HRGMv2_4187_52_18
Type: CAZyme
Location: 20013 - 22061 (-)
Type: CAZyme
Location: 20013 - 22061 (-)
Gene ID: HRGMv2_4187_52_19
Type: TC
Location: 22090 - 23160 (+)
Type: TC
Location: 22090 - 23160 (+)
Gene ID: HRGMv2_4187_52_20
Type: peptidase
Location: 23664 - 28262 (-)
Type: peptidase
Location: 23664 - 28262 (-)
Gene ID: HRGMv2_4187_52_21
Type: TC
Location: 28373 - 29116 (-)
Type: TC
Location: 28373 - 29116 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Succinivibrionaceae
Genus
Succinivibrio
Species
Succinivibrio hippei_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.