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Cluster: HRGMv2_4187_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4187_46 HRGMv2_4187_46_71 66011 66967 + 3.A.2.1.1
TC HRGMv2_4187_46 HRGMv2_4187_46_72 66992 67225 + 3.A.2.1.1
TC HRGMv2_4187_46 HRGMv2_4187_46_73 67264 67734 + 3.A.2.1.1
TC HRGMv2_4187_46 HRGMv2_4187_46_74 67747 68277 + 3.A.2.1.5
TC HRGMv2_4187_46 HRGMv2_4187_46_75 68293 69834 + 3.A.2.1.1
TC HRGMv2_4187_46 HRGMv2_4187_46_76 69843 70706 + 3.A.2.1.1
TC HRGMv2_4187_46 HRGMv2_4187_46_77 70726 72138 + 3.A.2.1.1
TC HRGMv2_4187_46 HRGMv2_4187_46_78 72159 72587 + 3.A.2.1.1
TC HRGMv2_4187_46 HRGMv2_4187_46_79 72844 74352 - 1.B.52.2.1
pfam HRGMv2_4187_46 HRGMv2_4187_46_80 74669 75232 - EFP | EFP_N | Elong-fact-P_C
pfam HRGMv2_4187_46 HRGMv2_4187_46_81 75517 76671 - DDE_Tnp_1
CAZyme HRGMv2_4187_46 HRGMv2_4187_46_82 76949 78001 - GT104
Gene ID: HRGMv2_4187_46_71
Type: TC
Location: 66011 - 66967 (+)
Gene ID: HRGMv2_4187_46_72
Type: TC
Location: 66992 - 67225 (+)
Gene ID: HRGMv2_4187_46_73
Type: TC
Location: 67264 - 67734 (+)
Gene ID: HRGMv2_4187_46_74
Type: TC
Location: 67747 - 68277 (+)
Gene ID: HRGMv2_4187_46_75
Type: TC
Location: 68293 - 69834 (+)
Gene ID: HRGMv2_4187_46_76
Type: TC
Location: 69843 - 70706 (+)
Gene ID: HRGMv2_4187_46_77
Type: TC
Location: 70726 - 72138 (+)
Gene ID: HRGMv2_4187_46_78
Type: TC
Location: 72159 - 72587 (+)
Gene ID: HRGMv2_4187_46_79
Type: TC
Location: 72844 - 74352 (-)
Gene ID: HRGMv2_4187_46_80
Type: pfam
Location: 74669 - 75232 (-)
Gene ID: HRGMv2_4187_46_81
Type: pfam
Location: 75517 - 76671 (-)
Gene ID: HRGMv2_4187_46_82
Type: CAZyme
Location: 76949 - 78001 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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