Cluster: HRGMv2_4187_CGC13
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4187
- CGC Family ID: CGCFAM_00007
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4187_38 | HRGMv2_4187_38_45 | 46261 | 46767 | + | 9.B.160.1.16 |
| STP | HRGMv2_4187_38 | HRGMv2_4187_38_46 | 46771 | 48288 | + | Pribosyltran |
| pfam | HRGMv2_4187_38 | HRGMv2_4187_38_47 | 48369 | 49544 | + | UDPG_MGDP_dh | NAD_Gly3P_dh_N | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N |
| CAZyme | HRGMv2_4187_38 | HRGMv2_4187_38_48 | 49599 | 50552 | + | GT2 |
Gene ID: HRGMv2_4187_38_45
Type: TC
Location: 46261 - 46767 (+)
Type: TC
Location: 46261 - 46767 (+)
Gene ID: HRGMv2_4187_38_46
Type: STP
Location: 46771 - 48288 (+)
Type: STP
Location: 46771 - 48288 (+)
Gene ID: HRGMv2_4187_38_47
Type: pfam
Location: 48369 - 49544 (+)
Type: pfam
Location: 48369 - 49544 (+)
Gene ID: HRGMv2_4187_38_48
Type: CAZyme
Location: 49599 - 50552 (+)
Type: CAZyme
Location: 49599 - 50552 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Succinivibrionaceae
Genus
Succinivibrio
Species
Succinivibrio hippei_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.