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Cluster: HRGMv2_4187_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4187_36 HRGMv2_4187_36_1 194 1498 - GT30
CAZyme HRGMv2_4187_36 HRGMv2_4187_36_2 1495 2526 - GT9
pfam HRGMv2_4187_36 HRGMv2_4187_36_3 2987 3952 + 3Beta_HSD | Epimerase | GDP_Man_Dehyd
TC HRGMv2_4187_36 HRGMv2_4187_36_4 3931 4785 + 9.B.104.1.1
pfam HRGMv2_4187_36 HRGMv2_4187_36_5 4841 5308 - FliL
pfam HRGMv2_4187_36 HRGMv2_4187_36_6 5328 7772 - Acyltransferase | GPAT_C
TC HRGMv2_4187_36 HRGMv2_4187_36_7 8067 9047 + 2.A.4.7.6
pfam HRGMv2_4187_36 HRGMv2_4187_36_8 9052 9885 + Hexapep | SATase_N
TC HRGMv2_4187_36 HRGMv2_4187_36_9 9942 11804 + 4.A.2.1.20
Gene ID: HRGMv2_4187_36_1
Type: CAZyme
Location: 194 - 1498 (-)
Gene ID: HRGMv2_4187_36_2
Type: CAZyme
Location: 1495 - 2526 (-)
Gene ID: HRGMv2_4187_36_3
Type: pfam
Location: 2987 - 3952 (+)
Gene ID: HRGMv2_4187_36_4
Type: TC
Location: 3931 - 4785 (+)
Gene ID: HRGMv2_4187_36_5
Type: pfam
Location: 4841 - 5308 (-)
Gene ID: HRGMv2_4187_36_6
Type: pfam
Location: 5328 - 7772 (-)
Gene ID: HRGMv2_4187_36_7
Type: TC
Location: 8067 - 9047 (+)
Gene ID: HRGMv2_4187_36_8
Type: pfam
Location: 9052 - 9885 (+)
Gene ID: HRGMv2_4187_36_9
Type: TC
Location: 9942 - 11804 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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