dbCAN Logo

Cluster: HRGMv2_4162_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4162_2 HRGMv2_4162_2_139 159541 161073 + 3.A.1.5.38
TC HRGMv2_4162_2 HRGMv2_4162_2_140 161114 162136 + 3.A.1.5.38
TC HRGMv2_4162_2 HRGMv2_4162_2_141 162133 163026 + 3.A.1.5.38
TC HRGMv2_4162_2 HRGMv2_4162_2_142 163026 164012 + 3.A.1.5.38
TC HRGMv2_4162_2 HRGMv2_4162_2_143 164005 164928 + 3.A.1.5.38
CAZyme HRGMv2_4162_2 HRGMv2_4162_2_144 164928 165905 + PL5_1
Gene ID: HRGMv2_4162_2_139
Type: TC
Location: 159541 - 161073 (+)
Gene ID: HRGMv2_4162_2_140
Type: TC
Location: 161114 - 162136 (+)
Gene ID: HRGMv2_4162_2_141
Type: TC
Location: 162133 - 163026 (+)
Gene ID: HRGMv2_4162_2_142
Type: TC
Location: 163026 - 164012 (+)
Gene ID: HRGMv2_4162_2_143
Type: TC
Location: 164005 - 164928 (+)
Gene ID: HRGMv2_4162_2_144
Type: CAZyme
Location: 164928 - 165905 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List