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Cluster: HRGMv2_4162_CGC64

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4162_90 HRGMv2_4162_90_1 124 615 + 4.A.2.1.7
pfam HRGMv2_4162_90 HRGMv2_4162_90_2 661 1515 + RapZ-like_N | PapZ_C
TC HRGMv2_4162_90 HRGMv2_4162_90_3 1512 1784 + 8.A.8.1.5
CAZyme HRGMv2_4162_90 HRGMv2_4162_90_4 1788 2513 - GT51
peptidase HRGMv2_4162_90 HRGMv2_4162_90_5 2510 3163 - C56.975
STP HRGMv2_4162_90 HRGMv2_4162_90_6 3396 5729 - HATPase_c | HisKA | PAS | Response_reg
TC HRGMv2_4162_90 HRGMv2_4162_90_7 5863 6945 - 1.B.42.1.2
TC HRGMv2_4162_90 HRGMv2_4162_90_8 6945 8024 - 1.B.42.1.2
Gene ID: HRGMv2_4162_90_1
Type: TC
Location: 124 - 615 (+)
Gene ID: HRGMv2_4162_90_2
Type: pfam
Location: 661 - 1515 (+)
Gene ID: HRGMv2_4162_90_3
Type: TC
Location: 1512 - 1784 (+)
Gene ID: HRGMv2_4162_90_4
Type: CAZyme
Location: 1788 - 2513 (-)
Gene ID: HRGMv2_4162_90_5
Type: peptidase
Location: 2510 - 3163 (-)
Gene ID: HRGMv2_4162_90_6
Type: STP
Location: 3396 - 5729 (-)
Gene ID: HRGMv2_4162_90_7
Type: TC
Location: 5863 - 6945 (-)
Gene ID: HRGMv2_4162_90_8
Type: TC
Location: 6945 - 8024 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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