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Cluster: HRGMv2_4162_CGC44

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4162_32 HRGMv2_4162_32_4 4222 5370 - CE9
sulfatase HRGMv2_4162_32 HRGMv2_4162_32_5 5425 6225 - S1_9
TC HRGMv2_4162_32 HRGMv2_4162_32_6 6551 8500 + 4.A.1.1.2
pfam HRGMv2_4162_32 HRGMv2_4162_32_7 8670 10337 + tRNA-synt_1c | tRNA-synt_1c_C | tRNA-synt_1c_C2
TC HRGMv2_4162_32 HRGMv2_4162_32_8 10381 11673 - 3.A.1.1.46
CAZyme HRGMv2_4162_32 HRGMv2_4162_32_9 11670 13811 - CBM66
TF HRGMv2_4162_32 HRGMv2_4162_32_10 13841 14842 - LacI
TC HRGMv2_4162_32 HRGMv2_4162_32_11 15366 16763 + 1.B.25.1.13
Gene ID: HRGMv2_4162_32_4
Type: CAZyme
Location: 4222 - 5370 (-)
Gene ID: HRGMv2_4162_32_5
Type: sulfatase
Location: 5425 - 6225 (-)
Gene ID: HRGMv2_4162_32_6
Type: TC
Location: 6551 - 8500 (+)
Gene ID: HRGMv2_4162_32_7
Type: pfam
Location: 8670 - 10337 (+)
Gene ID: HRGMv2_4162_32_8
Type: TC
Location: 10381 - 11673 (-)
Gene ID: HRGMv2_4162_32_9
Type: CAZyme
Location: 11670 - 13811 (-)
Gene ID: HRGMv2_4162_32_10
Type: TF
Location: 13841 - 14842 (-)
Gene ID: HRGMv2_4162_32_11
Type: TC
Location: 15366 - 16763 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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