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Cluster: HRGMv2_4162_CGC43

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4162_30 HRGMv2_4162_30_15 17175 18599 - GT20
pfam HRGMv2_4162_30 HRGMv2_4162_30_16 18574 19377 - Trehalose_PPase
TC HRGMv2_4162_30 HRGMv2_4162_30_17 19553 20533 - 3.A.1.2.2
TC HRGMv2_4162_30 HRGMv2_4162_30_18 20548 22062 - 3.A.1.2.2
TC HRGMv2_4162_30 HRGMv2_4162_30_19 22133 23122 - 3.A.1.2.2
peptidase HRGMv2_4162_30 HRGMv2_4162_30_20 23439 23996 - C56.UNW
pfam HRGMv2_4162_30 HRGMv2_4162_30_21 24409 24912 + Ferritin
TC HRGMv2_4162_30 HRGMv2_4162_30_22 25082 26425 + 2.A.13.1.2
pfam HRGMv2_4162_30 HRGMv2_4162_30_23 26502 26753 - DUF2766
TC HRGMv2_4162_30 HRGMv2_4162_30_24 27154 28575 + 2.A.1.3.51
pfam HRGMv2_4162_30 HRGMv2_4162_30_25 28664 29302 - LacAB_rpiB | DUF3666
TC HRGMv2_4162_30 HRGMv2_4162_30_26 29551 31725 + 8.A.59.4.1
Gene ID: HRGMv2_4162_30_15
Type: CAZyme
Location: 17175 - 18599 (-)
Gene ID: HRGMv2_4162_30_16
Type: pfam
Location: 18574 - 19377 (-)
Gene ID: HRGMv2_4162_30_17
Type: TC
Location: 19553 - 20533 (-)
Gene ID: HRGMv2_4162_30_18
Type: TC
Location: 20548 - 22062 (-)
Gene ID: HRGMv2_4162_30_19
Type: TC
Location: 22133 - 23122 (-)
Gene ID: HRGMv2_4162_30_20
Type: peptidase
Location: 23439 - 23996 (-)
Gene ID: HRGMv2_4162_30_21
Type: pfam
Location: 24409 - 24912 (+)
Gene ID: HRGMv2_4162_30_22
Type: TC
Location: 25082 - 26425 (+)
Gene ID: HRGMv2_4162_30_23
Type: pfam
Location: 26502 - 26753 (-)
Gene ID: HRGMv2_4162_30_24
Type: TC
Location: 27154 - 28575 (+)
Gene ID: HRGMv2_4162_30_25
Type: pfam
Location: 28664 - 29302 (-)
Gene ID: HRGMv2_4162_30_26
Type: TC
Location: 29551 - 31725 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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