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Cluster: HRGMv2_4162_CGC39

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4162_26 HRGMv2_4162_26_26 29382 30377 + 3.A.1.2.4
TC HRGMv2_4162_26 HRGMv2_4162_26_27 30449 31990 + 3.A.1.2.4
TC HRGMv2_4162_26 HRGMv2_4162_26_28 31968 33149 + 3.A.1.2.4
TF HRGMv2_4162_26 HRGMv2_4162_26_29 33178 34356 + HTH_AraC | HTH_AraC
CAZyme HRGMv2_4162_26 HRGMv2_4162_26_30 34410 35246 - GH73
CAZyme HRGMv2_4162_26 HRGMv2_4162_26_31 35561 37591 + GH13_19
STP HRGMv2_4162_26 HRGMv2_4162_26_32 37766 39022 + Aminotran_1_2
TC HRGMv2_4162_26 HRGMv2_4162_26_33 39027 39491 - 5.A.3.11.1
Gene ID: HRGMv2_4162_26_26
Type: TC
Location: 29382 - 30377 (+)
Gene ID: HRGMv2_4162_26_27
Type: TC
Location: 30449 - 31990 (+)
Gene ID: HRGMv2_4162_26_28
Type: TC
Location: 31968 - 33149 (+)
Gene ID: HRGMv2_4162_26_29
Type: TF
Location: 33178 - 34356 (+)
Gene ID: HRGMv2_4162_26_30
Type: CAZyme
Location: 34410 - 35246 (-)
Gene ID: HRGMv2_4162_26_31
Type: CAZyme
Location: 35561 - 37591 (+)
Gene ID: HRGMv2_4162_26_32
Type: STP
Location: 37766 - 39022 (+)
Gene ID: HRGMv2_4162_26_33
Type: TC
Location: 39027 - 39491 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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