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Cluster: HRGMv2_4162_CGC31

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4162_18 HRGMv2_4162_18_55 53120 53482 - 4.A.4.1.1
TC HRGMv2_4162_18 HRGMv2_4162_18_56 53495 54454 - 4.A.4.1.1
TC HRGMv2_4162_18 HRGMv2_4162_18_57 54451 55014 - 4.A.4.1.1
CAZyme HRGMv2_4162_18 HRGMv2_4162_18_58 55290 56390 + GH103
NULL(UNKNOWN) HRGMv2_4162_18 HRGMv2_4162_18_59 56548 56655 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4162_18 HRGMv2_4162_18_60 56652 57305 + 3.A.1.15.10
TC HRGMv2_4162_18 HRGMv2_4162_18_61 57302 58162 + 3.A.1.15.10
TC HRGMv2_4162_18 HRGMv2_4162_18_62 58177 59055 + 3.A.1.15.10
Gene ID: HRGMv2_4162_18_55
Type: TC
Location: 53120 - 53482 (-)
Gene ID: HRGMv2_4162_18_56
Type: TC
Location: 53495 - 54454 (-)
Gene ID: HRGMv2_4162_18_57
Type: TC
Location: 54451 - 55014 (-)
Gene ID: HRGMv2_4162_18_58
Type: CAZyme
Location: 55290 - 56390 (+)
Gene ID: HRGMv2_4162_18_59
Type:
Location: 56548 - 56655 (+)
Gene ID: HRGMv2_4162_18_60
Type: TC
Location: 56652 - 57305 (+)
Gene ID: HRGMv2_4162_18_61
Type: TC
Location: 57302 - 58162 (+)
Gene ID: HRGMv2_4162_18_62
Type: TC
Location: 58177 - 59055 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_4162_18_55 vegetarian > vegan 1.25406 0.01976

🧭 Explore Read Mapping of CGC

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