dbCAN Logo

Cluster: HRGMv2_4162_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4162_14 HRGMv2_4162_14_62 66702 67985 + CE8
pfam HRGMv2_4162_14 HRGMv2_4162_14_63 68043 69038 - Lactonase
pfam HRGMv2_4162_14 HRGMv2_4162_14_64 69179 69997 + Hydrolase | S6PP | S6PP | Hydrolase_3
TC HRGMv2_4162_14 HRGMv2_4162_14_65 69998 71056 - 3.A.1.8.1
TC HRGMv2_4162_14 HRGMv2_4162_14_66 71059 71748 - 3.A.1.8.1
TC HRGMv2_4162_14 HRGMv2_4162_14_67 71745 72521 - 3.A.1.8.1
TC HRGMv2_4162_14 HRGMv2_4162_14_68 72700 72849 - 2.A.6.2.49
TF HRGMv2_4162_14 HRGMv2_4162_14_69 72979 73767 + HTH_1
TC HRGMv2_4162_14 HRGMv2_4162_14_70 73835 75307 + 3.A.1.26.3
Gene ID: HRGMv2_4162_14_62
Type: CAZyme
Location: 66702 - 67985 (+)
Gene ID: HRGMv2_4162_14_63
Type: pfam
Location: 68043 - 69038 (-)
Gene ID: HRGMv2_4162_14_64
Type: pfam
Location: 69179 - 69997 (+)
Gene ID: HRGMv2_4162_14_65
Type: TC
Location: 69998 - 71056 (-)
Gene ID: HRGMv2_4162_14_66
Type: TC
Location: 71059 - 71748 (-)
Gene ID: HRGMv2_4162_14_67
Type: TC
Location: 71745 - 72521 (-)
Gene ID: HRGMv2_4162_14_68
Type: TC
Location: 72700 - 72849 (-)
Gene ID: HRGMv2_4162_14_69
Type: TF
Location: 72979 - 73767 (+)
Gene ID: HRGMv2_4162_14_70
Type: TC
Location: 73835 - 75307 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_4162_14_68 vegetarian > vegan 2.69539 0.01976

🧭 Explore Read Mapping of CGC

← Back to Cluster List