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Cluster: HRGMv2_4162_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4162_12 HRGMv2_4162_12_7 7087 7473 - 8.A.2.1.3
CAZyme HRGMv2_4162_12 HRGMv2_4162_12_8 7579 9138 + AA1
pfam HRGMv2_4162_12 HRGMv2_4162_12_9 9593 11983 - PQQ | PQQ | PQQ | PQQ | PQQ | PQQ | PQQ_2
STP HRGMv2_4162_12 HRGMv2_4162_12_10 12189 12725 + Pribosyltran
TC HRGMv2_4162_12 HRGMv2_4162_12_11 12931 13593 - 2.A.53.3.8
TC HRGMv2_4162_12 HRGMv2_4162_12_12 13701 14627 + 3.A.1.105.17
TC HRGMv2_4162_12 HRGMv2_4162_12_13 14624 15394 + 3.A.1.105.17
pfam HRGMv2_4162_12 HRGMv2_4162_12_14 15502 15942 + EIIA-man
CAZyme HRGMv2_4162_12 HRGMv2_4162_12_15 16006 17253 + CE4
Gene ID: HRGMv2_4162_12_7
Type: TC
Location: 7087 - 7473 (-)
Gene ID: HRGMv2_4162_12_8
Type: CAZyme
Location: 7579 - 9138 (+)
Gene ID: HRGMv2_4162_12_9
Type: pfam
Location: 9593 - 11983 (-)
Gene ID: HRGMv2_4162_12_10
Type: STP
Location: 12189 - 12725 (+)
Gene ID: HRGMv2_4162_12_11
Type: TC
Location: 12931 - 13593 (-)
Gene ID: HRGMv2_4162_12_12
Type: TC
Location: 13701 - 14627 (+)
Gene ID: HRGMv2_4162_12_13
Type: TC
Location: 14624 - 15394 (+)
Gene ID: HRGMv2_4162_12_14
Type: pfam
Location: 15502 - 15942 (+)
Gene ID: HRGMv2_4162_12_15
Type: CAZyme
Location: 16006 - 17253 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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