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Cluster: HRGMv2_4162_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4162_8 HRGMv2_4162_8_62 63658 65391 - 2.A.36.6.11
peptidase HRGMv2_4162_8 HRGMv2_4162_8_63 65489 66403 - S66.002
CAZyme HRGMv2_4162_8 HRGMv2_4162_8_64 66512 67123 + GH23
pfam HRGMv2_4162_8 HRGMv2_4162_8_65 67161 67892 - PilZ | PilZN
TC HRGMv2_4162_8 HRGMv2_4162_8_66 68099 68353 + 1.E.43.1.1
CAZyme HRGMv2_4162_8 HRGMv2_4162_8_67 68438 70120 - GH37
TC HRGMv2_4162_8 HRGMv2_4162_8_68 70558 71940 + 1.B.15.1.1
TC HRGMv2_4162_8 HRGMv2_4162_8_69 71979 74264 - 3.D.1.9.2
Gene ID: HRGMv2_4162_8_62
Type: TC
Location: 63658 - 65391 (-)
Gene ID: HRGMv2_4162_8_63
Type: peptidase
Location: 65489 - 66403 (-)
Gene ID: HRGMv2_4162_8_64
Type: CAZyme
Location: 66512 - 67123 (+)
Gene ID: HRGMv2_4162_8_65
Type: pfam
Location: 67161 - 67892 (-)
Gene ID: HRGMv2_4162_8_66
Type: TC
Location: 68099 - 68353 (+)
Gene ID: HRGMv2_4162_8_67
Type: CAZyme
Location: 68438 - 70120 (-)
Gene ID: HRGMv2_4162_8_68
Type: TC
Location: 70558 - 71940 (+)
Gene ID: HRGMv2_4162_8_69
Type: TC
Location: 71979 - 74264 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_4162_8_64 vegetarian > omnivore 1.36025 0.04735
HRGMv2_4162_8_64 vegetarian > vegan 1.37324 0.01976

🧭 Explore Read Mapping of CGC

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