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Cluster: HRGMv2_4158_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4158_6 HRGMv2_4158_6_53 69211 71985 + 3.A.11.2.1
TC HRGMv2_4158_6 HRGMv2_4158_6_54 72243 72731 - 3.D.7.2.3
TC HRGMv2_4158_6 HRGMv2_4158_6_55 72998 74677 - 3.D.7.2.3
TC HRGMv2_4158_6 HRGMv2_4158_6_56 74692 75642 - 3.D.7.2.2
CAZyme HRGMv2_4158_6 HRGMv2_4158_6_57 75957 76985 - GT9
STP HRGMv2_4158_6 HRGMv2_4158_6_58 77293 77919 - Pribosyltran
pfam HRGMv2_4158_6 HRGMv2_4158_6_59 78279 79457 - NrfD
TC HRGMv2_4158_6 HRGMv2_4158_6_60 79467 80225 - 5.A.3.3.3
Gene ID: HRGMv2_4158_6_53
Type: TC
Location: 69211 - 71985 (+)
Gene ID: HRGMv2_4158_6_54
Type: TC
Location: 72243 - 72731 (-)
Gene ID: HRGMv2_4158_6_55
Type: TC
Location: 72998 - 74677 (-)
Gene ID: HRGMv2_4158_6_56
Type: TC
Location: 74692 - 75642 (-)
Gene ID: HRGMv2_4158_6_57
Type: CAZyme
Location: 75957 - 76985 (-)
Gene ID: HRGMv2_4158_6_58
Type: STP
Location: 77293 - 77919 (-)
Gene ID: HRGMv2_4158_6_59
Type: pfam
Location: 78279 - 79457 (-)
Gene ID: HRGMv2_4158_6_60
Type: TC
Location: 79467 - 80225 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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