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Cluster: HRGMv2_4158_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4158_3 HRGMv2_4158_3_40 44462 45688 + GT8
pfam HRGMv2_4158_3 HRGMv2_4158_3_41 45696 46928 + Amino_oxidase | Amino_oxidase | NAD_binding_8
CAZyme HRGMv2_4158_3 HRGMv2_4158_3_42 46946 47962 + GT2
CAZyme HRGMv2_4158_3 HRGMv2_4158_3_43 47959 49455 + GT4
CAZyme HRGMv2_4158_3 HRGMv2_4158_3_44 49473 50945 + GT4
pfam HRGMv2_4158_3 HRGMv2_4158_3_45 50957 52165 + Glyco_transf_9
TC HRGMv2_4158_3 HRGMv2_4158_3_46 52276 53643 - 2.A.66.1.3
pfam HRGMv2_4158_3 HRGMv2_4158_3_47 54016 54255 - Ribosomal_S16
TC HRGMv2_4158_3 HRGMv2_4158_3_48 54286 55797 - 3.A.5.1.1
Gene ID: HRGMv2_4158_3_40
Type: CAZyme
Location: 44462 - 45688 (+)
Gene ID: HRGMv2_4158_3_41
Type: pfam
Location: 45696 - 46928 (+)
Gene ID: HRGMv2_4158_3_42
Type: CAZyme
Location: 46946 - 47962 (+)
Gene ID: HRGMv2_4158_3_43
Type: CAZyme
Location: 47959 - 49455 (+)
Gene ID: HRGMv2_4158_3_44
Type: CAZyme
Location: 49473 - 50945 (+)
Gene ID: HRGMv2_4158_3_45
Type: pfam
Location: 50957 - 52165 (+)
Gene ID: HRGMv2_4158_3_46
Type: TC
Location: 52276 - 53643 (-)
Gene ID: HRGMv2_4158_3_47
Type: pfam
Location: 54016 - 54255 (-)
Gene ID: HRGMv2_4158_3_48
Type: TC
Location: 54286 - 55797 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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