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Cluster: HRGMv2_4154_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4154_11 HRGMv2_4154_11_3 8726 9916 + 1.B.18.2.3
TC HRGMv2_4154_11 HRGMv2_4154_11_4 9921 10694 + 3.A.1.101.1
TC HRGMv2_4154_11 HRGMv2_4154_11_5 10691 11353 + 3.A.1.101.1
TC HRGMv2_4154_11 HRGMv2_4154_11_6 11350 12516 + 8.A.4.1.1
NULL(UNKNOWN) HRGMv2_4154_11 HRGMv2_4154_11_7 12528 13676 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_4154_11 HRGMv2_4154_11_8 13748 15793 + GT2 | GT8
Gene ID: HRGMv2_4154_11_3
Type: TC
Location: 8726 - 9916 (+)
Gene ID: HRGMv2_4154_11_4
Type: TC
Location: 9921 - 10694 (+)
Gene ID: HRGMv2_4154_11_5
Type: TC
Location: 10691 - 11353 (+)
Gene ID: HRGMv2_4154_11_6
Type: TC
Location: 11350 - 12516 (+)
Gene ID: HRGMv2_4154_11_7
Type:
Location: 12528 - 13676 (+)
Gene ID: HRGMv2_4154_11_8
Type: CAZyme
Location: 13748 - 15793 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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