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Cluster: HRGMv2_4154_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4154_5 HRGMv2_4154_5_1 86 2608 + GT51
pfam HRGMv2_4154_5 HRGMv2_4154_5_2 2683 3537 + PCMT | GCD14
pfam HRGMv2_4154_5 HRGMv2_4154_5_3 3734 4729 + NAD_Gly3P_dh_N | NAD_Gly3P_dh_C | GPD_NAD_C_bact
TC HRGMv2_4154_5 HRGMv2_4154_5_4 5214 9002 + 3.D.1.4.3
TC HRGMv2_4154_5 HRGMv2_4154_5_5 9005 9970 + 3.D.1.4.3
TC HRGMv2_4154_5 HRGMv2_4154_5_6 9981 10430 + 3.D.1.4.3
STP HRGMv2_4154_5 HRGMv2_4154_5_7 10434 10988 + Fer4 | Fer4
pfam HRGMv2_4154_5 HRGMv2_4154_5_8 11116 11655 + Complex1_30kDa
TC HRGMv2_4154_5 HRGMv2_4154_5_9 11655 12755 + 3.D.1.4.3
Gene ID: HRGMv2_4154_5_1
Type: CAZyme
Location: 86 - 2608 (+)
Gene ID: HRGMv2_4154_5_2
Type: pfam
Location: 2683 - 3537 (+)
Gene ID: HRGMv2_4154_5_3
Type: pfam
Location: 3734 - 4729 (+)
Gene ID: HRGMv2_4154_5_4
Type: TC
Location: 5214 - 9002 (+)
Gene ID: HRGMv2_4154_5_5
Type: TC
Location: 9005 - 9970 (+)
Gene ID: HRGMv2_4154_5_6
Type: TC
Location: 9981 - 10430 (+)
Gene ID: HRGMv2_4154_5_7
Type: STP
Location: 10434 - 10988 (+)
Gene ID: HRGMv2_4154_5_8
Type: pfam
Location: 11116 - 11655 (+)
Gene ID: HRGMv2_4154_5_9
Type: TC
Location: 11655 - 12755 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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