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Cluster: HRGMv2_4154_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4154_53 HRGMv2_4154_53_1 161 1201 - 9.B.157.1.2
STP HRGMv2_4154_53 HRGMv2_4154_53_2 1205 2269 - GAF
NULL(UNKNOWN) HRGMv2_4154_53 HRGMv2_4154_53_3 3281 5185 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_4154_53 HRGMv2_4154_53_4 5724 7307 + GT4
CAZyme HRGMv2_4154_53 HRGMv2_4154_53_5 7491 8261 + GT2
CAZyme HRGMv2_4154_53 HRGMv2_4154_53_6 8672 9751 - GT2
Gene ID: HRGMv2_4154_53_1
Type: TC
Location: 161 - 1201 (-)
Gene ID: HRGMv2_4154_53_2
Type: STP
Location: 1205 - 2269 (-)
Gene ID: HRGMv2_4154_53_3
Type:
Location: 3281 - 5185 (+)
Gene ID: HRGMv2_4154_53_4
Type: CAZyme
Location: 5724 - 7307 (+)
Gene ID: HRGMv2_4154_53_5
Type: CAZyme
Location: 7491 - 8261 (+)
Gene ID: HRGMv2_4154_53_6
Type: CAZyme
Location: 8672 - 9751 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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