Cluster: HRGMv2_4153_CGC7
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_4153
- CGC Family ID: CGCFAM_00132
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4153_69 | HRGMv2_4153_69_2 | 521 | 1849 | - | 9.B.174.1.1 |
| pfam | HRGMv2_4153_69 | HRGMv2_4153_69_3 | 2506 | 3009 | - | Rubrerythrin | RUBY_RBDX |
| CAZyme | HRGMv2_4153_69 | HRGMv2_4153_69_4 | 3111 | 4226 | - | GT4 |
| pfam | HRGMv2_4153_69 | HRGMv2_4153_69_5 | 4223 | 5686 | - | Wzy_C |
| CAZyme | HRGMv2_4153_69 | HRGMv2_4153_69_6 | 5689 | 6564 | - | GT2 |
| pfam | HRGMv2_4153_69 | HRGMv2_4153_69_7 | 6567 | 7850 | - | Polysacc_synt | Polysacc_synt_3 |
| CAZyme | HRGMv2_4153_69 | HRGMv2_4153_69_8 | 7847 | 8998 | - | GT4 |
Gene ID: HRGMv2_4153_69_2
Type: TC
Location: 521 - 1849 (-)
Type: TC
Location: 521 - 1849 (-)
Gene ID: HRGMv2_4153_69_3
Type: pfam
Location: 2506 - 3009 (-)
Type: pfam
Location: 2506 - 3009 (-)
Gene ID: HRGMv2_4153_69_4
Type: CAZyme
Location: 3111 - 4226 (-)
Type: CAZyme
Location: 3111 - 4226 (-)
Gene ID: HRGMv2_4153_69_5
Type: pfam
Location: 4223 - 5686 (-)
Type: pfam
Location: 4223 - 5686 (-)
Gene ID: HRGMv2_4153_69_6
Type: CAZyme
Location: 5689 - 6564 (-)
Type: CAZyme
Location: 5689 - 6564 (-)
Gene ID: HRGMv2_4153_69_7
Type: pfam
Location: 6567 - 7850 (-)
Type: pfam
Location: 6567 - 7850 (-)
Gene ID: HRGMv2_4153_69_8
Type: CAZyme
Location: 7847 - 8998 (-)
Type: CAZyme
Location: 7847 - 8998 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Desulfobacterota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Desulfovibrio
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_4153_69_3 | vegetarian > vegan | 1.00962 | 0.01135 |