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Cluster: HRGMv2_4153_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4153_23 HRGMv2_4153_23_1 535 1332 + 2.A.102.4.1
TC HRGMv2_4153_23 HRGMv2_4153_23_2 1481 2347 + 2.A.115.1.5
peptidase HRGMv2_4153_23 HRGMv2_4153_23_3 2369 3577 + M38.UNW
pfam HRGMv2_4153_23 HRGMv2_4153_23_4 3815 4153 + Hpt
CAZyme HRGMv2_4153_23 HRGMv2_4153_23_5 4480 8730 - GT3 | GT35
CAZyme HRGMv2_4153_23 HRGMv2_4153_23_6 9275 10789 - GH57
CAZyme HRGMv2_4153_23 HRGMv2_4153_23_7 10789 12114 - GT4
CAZyme HRGMv2_4153_23 HRGMv2_4153_23_8 12161 14263 - GH133
TC HRGMv2_4153_23 HRGMv2_4153_23_9 14751 15872 + 3.A.1.4.8
TC HRGMv2_4153_23 HRGMv2_4153_23_10 16013 16918 + 3.A.1.4.1
TC HRGMv2_4153_23 HRGMv2_4153_23_11 16915 17925 + 3.A.1.4.8
TC HRGMv2_4153_23 HRGMv2_4153_23_12 17922 18692 + 3.A.1.4.10
TC HRGMv2_4153_23 HRGMv2_4153_23_13 18696 19406 + 3.A.1.4.10
Gene ID: HRGMv2_4153_23_1
Type: TC
Location: 535 - 1332 (+)
Gene ID: HRGMv2_4153_23_2
Type: TC
Location: 1481 - 2347 (+)
Gene ID: HRGMv2_4153_23_3
Type: peptidase
Location: 2369 - 3577 (+)
Gene ID: HRGMv2_4153_23_4
Type: pfam
Location: 3815 - 4153 (+)
Gene ID: HRGMv2_4153_23_5
Type: CAZyme
Location: 4480 - 8730 (-)
Gene ID: HRGMv2_4153_23_6
Type: CAZyme
Location: 9275 - 10789 (-)
Gene ID: HRGMv2_4153_23_7
Type: CAZyme
Location: 10789 - 12114 (-)
Gene ID: HRGMv2_4153_23_8
Type: CAZyme
Location: 12161 - 14263 (-)
Gene ID: HRGMv2_4153_23_9
Type: TC
Location: 14751 - 15872 (+)
Gene ID: HRGMv2_4153_23_10
Type: TC
Location: 16013 - 16918 (+)
Gene ID: HRGMv2_4153_23_11
Type: TC
Location: 16915 - 17925 (+)
Gene ID: HRGMv2_4153_23_12
Type: TC
Location: 17922 - 18692 (+)
Gene ID: HRGMv2_4153_23_13
Type: TC
Location: 18696 - 19406 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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