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Cluster: HRGMv2_4153_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4153_20 HRGMv2_4153_20_1 3 491 + 3.A.1.122.12
CAZyme HRGMv2_4153_20 HRGMv2_4153_20_2 850 2814 + GT4
STP HRGMv2_4153_20 HRGMv2_4153_20_3 2869 4320 + PfkB
STP HRGMv2_4153_20 HRGMv2_4153_20_4 4436 5410 + Glucokinase
TC HRGMv2_4153_20 HRGMv2_4153_20_5 5709 7820 + 9.B.34.1.2
pfam HRGMv2_4153_20 HRGMv2_4153_20_6 8350 8922 + Cytochrom_NNT | Mtrc-MtrF_II-IV_dom
NULL(UNKNOWN) HRGMv2_4153_20 HRGMv2_4153_20_7 8919 9368 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4153_20 HRGMv2_4153_20_8 9432 11702 + 3.D.1.9.2
Gene ID: HRGMv2_4153_20_1
Type: TC
Location: 3 - 491 (+)
Gene ID: HRGMv2_4153_20_2
Type: CAZyme
Location: 850 - 2814 (+)
Gene ID: HRGMv2_4153_20_3
Type: STP
Location: 2869 - 4320 (+)
Gene ID: HRGMv2_4153_20_4
Type: STP
Location: 4436 - 5410 (+)
Gene ID: HRGMv2_4153_20_5
Type: TC
Location: 5709 - 7820 (+)
Gene ID: HRGMv2_4153_20_6
Type: pfam
Location: 8350 - 8922 (+)
Gene ID: HRGMv2_4153_20_7
Type:
Location: 8919 - 9368 (+)
Gene ID: HRGMv2_4153_20_8
Type: TC
Location: 9432 - 11702 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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