Cluster: HRGMv2_4153_CGC2
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4153
- CGC Family ID: CGCFAM_02820
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4153_11 | HRGMv2_4153_11_3 | 6186 | 8624 | + | GT51 |
| pfam | HRGMv2_4153_11 | HRGMv2_4153_11_4 | 8971 | 9870 | + | PCMT | GCD14 |
| TC | HRGMv2_4153_11 | HRGMv2_4153_11_5 | 9867 | 10193 | + | 2.A.7.1.10 |
Gene ID: HRGMv2_4153_11_3
Type: CAZyme
Location: 6186 - 8624 (+)
Type: CAZyme
Location: 6186 - 8624 (+)
Gene ID: HRGMv2_4153_11_4
Type: pfam
Location: 8971 - 9870 (+)
Type: pfam
Location: 8971 - 9870 (+)
Gene ID: HRGMv2_4153_11_5
Type: TC
Location: 9867 - 10193 (+)
Type: TC
Location: 9867 - 10193 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Desulfobacterota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Desulfovibrio
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.