Cluster: HRGMv2_4153_CGC11
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4153
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4153_152 | HRGMv2_4153_152_2 | 732 | 1835 | + | GT4 |
| TC | HRGMv2_4153_152 | HRGMv2_4153_152_3 | 2034 | 3434 | - | 9.B.18.1.2 |
| TC | HRGMv2_4153_152 | HRGMv2_4153_152_4 | 3463 | 4581 | + | 3.A.1.3.17 |
| TC | HRGMv2_4153_152 | HRGMv2_4153_152_5 | 5082 | 5774 | + | 3.A.1.3.23 |
| TC | HRGMv2_4153_152 | HRGMv2_4153_152_6 | 5778 | 6536 | + | 3.A.1.3.24 |
| TC | HRGMv2_4153_152 | HRGMv2_4153_152_7 | 6683 | 7156 | + | 3.A.1.3.2 |
Gene ID: HRGMv2_4153_152_2
Type: CAZyme
Location: 732 - 1835 (+)
Type: CAZyme
Location: 732 - 1835 (+)
Gene ID: HRGMv2_4153_152_3
Type: TC
Location: 2034 - 3434 (-)
Type: TC
Location: 2034 - 3434 (-)
Gene ID: HRGMv2_4153_152_4
Type: TC
Location: 3463 - 4581 (+)
Type: TC
Location: 3463 - 4581 (+)
Gene ID: HRGMv2_4153_152_5
Type: TC
Location: 5082 - 5774 (+)
Type: TC
Location: 5082 - 5774 (+)
Gene ID: HRGMv2_4153_152_6
Type: TC
Location: 5778 - 6536 (+)
Type: TC
Location: 5778 - 6536 (+)
Gene ID: HRGMv2_4153_152_7
Type: TC
Location: 6683 - 7156 (+)
Type: TC
Location: 6683 - 7156 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Desulfobacterota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Desulfovibrio
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.