Cluster: HRGMv2_4152_CGC8
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4152
- CGC Family ID: CGCFAM_10543
- Continent: NA
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4152_6 | HRGMv2_4152_6_59 | 70535 | 72532 | - | 3.A.1.135.6 |
| TC | HRGMv2_4152_6 | HRGMv2_4152_6_60 | 72529 | 74649 | - | 3.A.1.135.6 |
| TF | HRGMv2_4152_6 | HRGMv2_4152_6_61 | 75599 | 76024 | + | HTH_5 |
| STP | HRGMv2_4152_6 | HRGMv2_4152_6_62 | 76021 | 76239 | + | HMA |
| TC | HRGMv2_4152_6 | HRGMv2_4152_6_63 | 76327 | 78246 | + | 3.A.3.6.10 |
| pfam | HRGMv2_4152_6 | HRGMv2_4152_6_64 | 78342 | 79166 | - | Pan_kinase |
| pfam | HRGMv2_4152_6 | HRGMv2_4152_6_65 | 79183 | 80895 | - | OPT |
| CAZyme | HRGMv2_4152_6 | HRGMv2_4152_6_66 | 81007 | 82038 | - | GT2 |
Gene ID: HRGMv2_4152_6_59
Type: TC
Location: 70535 - 72532 (-)
Type: TC
Location: 70535 - 72532 (-)
Gene ID: HRGMv2_4152_6_60
Type: TC
Location: 72529 - 74649 (-)
Type: TC
Location: 72529 - 74649 (-)
Gene ID: HRGMv2_4152_6_61
Type: TF
Location: 75599 - 76024 (+)
Type: TF
Location: 75599 - 76024 (+)
Gene ID: HRGMv2_4152_6_62
Type: STP
Location: 76021 - 76239 (+)
Type: STP
Location: 76021 - 76239 (+)
Gene ID: HRGMv2_4152_6_63
Type: TC
Location: 76327 - 78246 (+)
Type: TC
Location: 76327 - 78246 (+)
Gene ID: HRGMv2_4152_6_64
Type: pfam
Location: 78342 - 79166 (-)
Type: pfam
Location: 78342 - 79166 (-)
Gene ID: HRGMv2_4152_6_65
Type: pfam
Location: 79183 - 80895 (-)
Type: pfam
Location: 79183 - 80895 (-)
Gene ID: HRGMv2_4152_6_66
Type: CAZyme
Location: 81007 - 82038 (-)
Type: CAZyme
Location: 81007 - 82038 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Eggerthellaceae
Genus
Aphodovivens
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.