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Cluster: HRGMv2_4152_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4152_2 HRGMv2_4152_2_332 349524 350246 + 9.B.18.1.2
pfam HRGMv2_4152_2 HRGMv2_4152_2_333 350391 352097 + PGM_PMM_I | PGM_PMM_II | PGM_PMM_III
pfam HRGMv2_4152_2 HRGMv2_4152_2_334 352094 353440 + NTP_transferase | MannoseP_isomer | Cupin_2
CAZyme HRGMv2_4152_2 HRGMv2_4152_2_335 353440 354219 + GT26
pfam HRGMv2_4152_2 HRGMv2_4152_2_336 354224 354760 + Hexapep | Hexapep_2
CAZyme HRGMv2_4152_2 HRGMv2_4152_2_337 355495 355917 + GT4
CAZyme HRGMv2_4152_2 HRGMv2_4152_2_338 356274 357314 + GT2
CAZyme HRGMv2_4152_2 HRGMv2_4152_2_339 357372 358370 + GT2
Gene ID: HRGMv2_4152_2_332
Type: TC
Location: 349524 - 350246 (+)
Gene ID: HRGMv2_4152_2_333
Type: pfam
Location: 350391 - 352097 (+)
Gene ID: HRGMv2_4152_2_334
Type: pfam
Location: 352094 - 353440 (+)
Gene ID: HRGMv2_4152_2_335
Type: CAZyme
Location: 353440 - 354219 (+)
Gene ID: HRGMv2_4152_2_336
Type: pfam
Location: 354224 - 354760 (+)
Gene ID: HRGMv2_4152_2_337
Type: CAZyme
Location: 355495 - 355917 (+)
Gene ID: HRGMv2_4152_2_338
Type: CAZyme
Location: 356274 - 357314 (+)
Gene ID: HRGMv2_4152_2_339
Type: CAZyme
Location: 357372 - 358370 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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