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Cluster: HRGMv2_4152_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4152_2 HRGMv2_4152_2_286 302768 303421 + 8.A.3.2.3
TC HRGMv2_4152_2 HRGMv2_4152_2_287 303434 304282 + 8.A.3.1.2
pfam HRGMv2_4152_2 HRGMv2_4152_2_288 304279 304932 + CpsB_CapC
pfam HRGMv2_4152_2 HRGMv2_4152_2_289 305449 305967 + NusG
TC HRGMv2_4152_2 HRGMv2_4152_2_290 306093 306836 + 9.B.18.1.2
TC HRGMv2_4152_2 HRGMv2_4152_2_291 306796 307623 + 9.B.18.1.3
NULL(UNKNOWN) HRGMv2_4152_2 HRGMv2_4152_2_292 307630 308307 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_4152_2 HRGMv2_4152_2_293 308310 309656 + NTP_transferase | MannoseP_isomer | Cupin_2
CAZyme HRGMv2_4152_2 HRGMv2_4152_2_294 309663 310790 + GT4
Gene ID: HRGMv2_4152_2_286
Type: TC
Location: 302768 - 303421 (+)
Gene ID: HRGMv2_4152_2_287
Type: TC
Location: 303434 - 304282 (+)
Gene ID: HRGMv2_4152_2_288
Type: pfam
Location: 304279 - 304932 (+)
Gene ID: HRGMv2_4152_2_289
Type: pfam
Location: 305449 - 305967 (+)
Gene ID: HRGMv2_4152_2_290
Type: TC
Location: 306093 - 306836 (+)
Gene ID: HRGMv2_4152_2_291
Type: TC
Location: 306796 - 307623 (+)
Gene ID: HRGMv2_4152_2_292
Type:
Location: 307630 - 308307 (+)
Gene ID: HRGMv2_4152_2_293
Type: pfam
Location: 308310 - 309656 (+)
Gene ID: HRGMv2_4152_2_294
Type: CAZyme
Location: 309663 - 310790 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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