Cluster: HRGMv2_4151_CGC3
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4151
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4151_67 | HRGMv2_4151_67_3 | 2296 | 3093 | - | 3.A.1.20.1 |
| STP | HRGMv2_4151_67 | HRGMv2_4151_67_4 | 3093 | 4085 | - | SBP_bac_1 |
| TC | HRGMv2_4151_67 | HRGMv2_4151_67_5 | 4287 | 8450 | - | 2.A.9.3.4 |
| NULL(UNKNOWN) | HRGMv2_4151_67 | HRGMv2_4151_67_6 | 8686 | 9000 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_4151_67 | HRGMv2_4151_67_7 | 9151 | 9432 | - | LicD |
| CAZyme | HRGMv2_4151_67 | HRGMv2_4151_67_8 | 9432 | 10028 | - | GT4 |
Gene ID: HRGMv2_4151_67_3
Type: TC
Location: 2296 - 3093 (-)
Type: TC
Location: 2296 - 3093 (-)
Gene ID: HRGMv2_4151_67_4
Type: STP
Location: 3093 - 4085 (-)
Type: STP
Location: 3093 - 4085 (-)
Gene ID: HRGMv2_4151_67_5
Type: TC
Location: 4287 - 8450 (-)
Type: TC
Location: 4287 - 8450 (-)
Gene ID: HRGMv2_4151_67_6
Type:
Location: 8686 - 9000 (-)
Type:
Location: 8686 - 9000 (-)
Gene ID: HRGMv2_4151_67_7
Type: pfam
Location: 9151 - 9432 (-)
Type: pfam
Location: 9151 - 9432 (-)
Gene ID: HRGMv2_4151_67_8
Type: CAZyme
Location: 9432 - 10028 (-)
Type: CAZyme
Location: 9432 - 10028 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Eggerthellaceae
Genus
Aphodovivens
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.