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Cluster: HRGMv2_4149_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4149_29 HRGMv2_4149_29_4 7087 8403 + 3.A.1.1.45
TC HRGMv2_4149_29 HRGMv2_4149_29_5 8467 9321 + 3.A.1.1.45
TC HRGMv2_4149_29 HRGMv2_4149_29_6 9321 10160 + 3.A.1.1.45
TC HRGMv2_4149_29 HRGMv2_4149_29_7 10250 11443 + 3.A.1.1.22
CAZyme HRGMv2_4149_29 HRGMv2_4149_29_8 11619 13103 + GH77
CAZyme HRGMv2_4149_29 HRGMv2_4149_29_9 13150 15420 + GT35
TF HRGMv2_4149_29 HRGMv2_4149_29_10 15616 16335 - GntR
TC HRGMv2_4149_29 HRGMv2_4149_29_11 16625 17917 + 4.A.1.1.8
Gene ID: HRGMv2_4149_29_4
Type: TC
Location: 7087 - 8403 (+)
Gene ID: HRGMv2_4149_29_5
Type: TC
Location: 8467 - 9321 (+)
Gene ID: HRGMv2_4149_29_6
Type: TC
Location: 9321 - 10160 (+)
Gene ID: HRGMv2_4149_29_7
Type: TC
Location: 10250 - 11443 (+)
Gene ID: HRGMv2_4149_29_8
Type: CAZyme
Location: 11619 - 13103 (+)
Gene ID: HRGMv2_4149_29_9
Type: CAZyme
Location: 13150 - 15420 (+)
Gene ID: HRGMv2_4149_29_10
Type: TF
Location: 15616 - 16335 (-)
Gene ID: HRGMv2_4149_29_11
Type: TC
Location: 16625 - 17917 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Actinomycetota
→
Class
Coriobacteriia
→
Order
Coriobacteriales
→
Family
Atopobiaceae
→
Genus
UBA7741
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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