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Cluster: HRGMv2_4147_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4147_7 HRGMv2_4147_7_40 46769 47743 - GT2
CAZyme HRGMv2_4147_7 HRGMv2_4147_7_41 47872 53766 - CBM13 | CBM13 | CBM13 | GH73
pfam HRGMv2_4147_7 HRGMv2_4147_7_42 54639 55115 - CTP_transf_like
TC HRGMv2_4147_7 HRGMv2_4147_7_43 55143 56930 - 3.A.1.103.5
TC HRGMv2_4147_7 HRGMv2_4147_7_44 56940 57722 - 3.A.1.103.6
NULL(UNKNOWN) HRGMv2_4147_7 HRGMv2_4147_7_45 57988 58974 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_4147_7 HRGMv2_4147_7_46 58971 59423 - DUF4869
CAZyme HRGMv2_4147_7 HRGMv2_4147_7_47 59878 61080 - GT2
Gene ID: HRGMv2_4147_7_40
Type: CAZyme
Location: 46769 - 47743 (-)
Gene ID: HRGMv2_4147_7_41
Type: CAZyme
Location: 47872 - 53766 (-)
Gene ID: HRGMv2_4147_7_42
Type: pfam
Location: 54639 - 55115 (-)
Gene ID: HRGMv2_4147_7_43
Type: TC
Location: 55143 - 56930 (-)
Gene ID: HRGMv2_4147_7_44
Type: TC
Location: 56940 - 57722 (-)
Gene ID: HRGMv2_4147_7_45
Type:
Location: 57988 - 58974 (-)
Gene ID: HRGMv2_4147_7_46
Type: pfam
Location: 58971 - 59423 (-)
Gene ID: HRGMv2_4147_7_47
Type: CAZyme
Location: 59878 - 61080 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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